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NUEVO CURSO

BIOINFORMATICS AND NETWORK BIOLOGY: 
From genomic data to profiles, networks and pathways
22,23,24 - June - 2011  
Centro de Investigación del Cáncer (CiC-IBMCC, CSIC/USAL)
Salamanca, Spain

 PROGRAMA

Day 1  –  22.June.2011 (Wednesday)

Topic 1: Genomic & transcriptomic profiling: microarray data analysis (focus on Affymetrix)
Gene arrays, exon arrays, miRs arrays, copy number arrays.
Bioconductor-R tools, GEO, Gene Expression Atlas, GATExplorer.


Day 2  –  23.June.2011 (Thursday)

- Topic 2: First steps for Next Generation Sequencing (NGS) data analysis.
Platforms (454, Illumina, SOLiD), Bioconductor-R tools for NGS (RNAseq). 

Topic 3: Bioinformatic tools forfunctional annotation and analysis of selected gene lists.
Enrichment Analysis, DAVID, GSEA, Blast2GO, GeneTerm Linker, iHop.


Day 3  –  24.June.2011 (Friday)

Topic 4: Construction of gene/protein networks and exploration of pathways using bioinformatic tools.
Molecular Interactions (PSIMEx-PSICQUIC), Visualization (Cytoscape, Ingenuity), Pathways (Reactome, KEGG), Disease Networks (NetClassifier, DisGeNET).

 

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© Centro de Investigación del Cáncer (CIC-IBMCC, USAL/CSIC) Salamanca, España