BIOINFORMATICS AND FUNCTIONAL GENOMICS RESEARCH GROUP

Dr. Javier De Las Rivas

Carlos Prieto, Alberto Risueno, Celia Fontanillo, Beatríz Rosón

http://www.cicancer.org/lab19a

The Bioinformatics and Functional Genomics Research Group at the Cancer Research Center develops research in bioinformatics and computational biology with particular interest in studies on transcriptome coexpression networks and protein interaction networks, aiming to integrate and analyze complex biological systems derived from experimental "omic" techniques. In all this work, they pay special attention to biological systems involved in cancer and metastatic processes.

--- --- ---

Links to some algorithms and bioinformatics tools developed by our research group are included below.

alteredExpression - Algorithm to find deregulated genes

URL: http://bioinfow.dep.usal.es/AlteredExpression

APID - Agile Protein Interaction DataAnalyzer

URL: http://bioinfow.dep.usal.es/apid

GATE - Genomic and Transcriptomic Explorer

URL: http://bioinfow.dep.usal.es/xgate

mapCGHetExpression - Tool to map CGH and expression changes

URL: http://cicblade.dep.usal.es

webbioc - BioConductor Web Tool

URL: http://cicblade.dep.usal.es

--- --- ---

PUBLICATIONS

Scientific Publications: ncbi PubMed

--- --- ---

Other WEB SITES of interest in Functional Genomics

BioConductor: http://www.bioconductor.org

R Project for Statistical Computing: http://www.r-project.org

ENSEMBL Genome Browser: http://www.ensembl.org